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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Soybean-LG
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps O
Start
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Contig_W82
Contig_W82_mismatch
Marker_BARCssr
Marker_BARCssr_confirmed
Marker_RFLP
Marker_SSR-from-BAC
Marker_SSR-from-BAC_confirmed
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
map_based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Soybean - LG [ View Map Set Info ]
Map Name: O
Map Start: 0 cM
Map Stop: 137 cM
Features by Type:
21 Contig_W82
38 Contig_W82_mismatch
16 Marker_BARCssr
3 Marker_BARCssr_confirmed
3 Marker_RFLP
4 Marker_SSR-from-BAC
8 Marker_SSR-from-BAC_confirmed
93 Total

Map Features

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Items 1 to 25 of 93.       of 4 | Next
Soybean - LG - O
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
WmFPC_Contig204 Contig_W82_mismatch 62.05 - 65.57 No other positions
WmFPC_Contig227 Contig_W82_mismatch 51.9 - 53.66 No other positions
O_m_Satt466_1 Marker_BARCssr_confirmed 53.66 Soybean - CONTIG - WmFPC_Contig227 O_m_Satt466_1 Marker_BARCssr_confirmed 2.64 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - O Satt466 SSR 53.66 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - O Satt466 SSR 53.67 (cM) Automated name-based View Maps
WmFPC_Contig369 Contig_W82_mismatch 46.03 - 57.77 No other positions
WmFPC_Contig381 Contig_W82_mismatch 9.63 - 18.7 No other positions
WmFPC_Contig385 Contig_W82_mismatch 49.72 - 52.28 No other positions
O_m_Sat_221_1 Marker_BARCssr 51 Soybean - CONTIG - WmFPC_Contig385 O_m2_Sat_221_1 Marker_BARCssr 2.1 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - O Sat_221 SSR 51 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - O Sat_221 SSR 51.01 (cM) Automated name-based View Maps
WmFPC_Contig395 Contig_W82_mismatch 6.91 - 12.15 No other positions
WmFPC_Contig396 Contig_W82_mismatch 8.08 - 10.98 No other positions
WmFPC_Contig464 Contig_W82_mismatch 40.42 - 44.16 No other positions
WmFPC_Contig539 Contig_W82_mismatch 78.73 - 85.42 No other positions
WmFPC_Contig584 Contig_W82_mismatch 39.78 - 44.8 No other positions
WmFPC_Contig933 Contig_W82_mismatch 57.73 - 61.26 No other positions
WmFPC_Contig1056 Contig_W82_mismatch 128.28 - 131.32 No other positions
WmFPC_Contig1274 Contig_W82_mismatch 54.67 - 59.19 No other positions
WmFPC_Contig1626 Contig_W82_mismatch 73.45 - 75.55 No other positions
O_m_SSR0210_1 Marker_SSR-from-BAC_confirmed 74.5 Soybean - CONTIG - WmFPC_Contig1626 O_m_SSR0210_1 Marker_SSR-from-BAC_confirmed 1.36 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - O SSR0210_1 SSR 74.5 (cM) Automated name-based View Maps
WmFPC_Contig2029 Contig_W82_mismatch 59.49 - 86.86 No other positions
O_m_SSR0213_1 Marker_SSR-from-BAC_confirmed 60 Soybean - CONTIG - WmFPC_Contig2029 O_m_SSR0213_1 Marker_SSR-from-BAC_confirmed 2.02 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - O SSR0213_1 SSR 60 (cM) Automated name-based View Maps
O_m_SSR2907_1 Marker_SSR-from-BAC 61.5 Soybean - GmComposite2003 - O SSR2907_1 SSR 61.5 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig2029 O_m_SSR2907_1 Marker_SSR-from-BAC 2.02 (cM) Automated name-based View Maps
WmFPC_Contig2056 Contig_W82_mismatch 122.91 - 123.95 No other positions
WmFPC_Contig2141 Contig_W82_mismatch 81.39 - 82.77 No other positions
WmFPC_Contig2173 Contig_W82_mismatch 9.53 - 119.5 No other positions
O_m_Satt243_1 Marker_BARCssr 119.5 Soybean - GmComposite2003 - O Satt243 SSR 119.5 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - O Satt243 SSR 119.5 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig2173 O_m2_Satt243_1 Marker_BARCssr 2.44 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig7539 O_m2_Satt243_1 Marker_BARCssr 4.91 (cM) Automated name-based View Maps
WmFPC_Contig2481 Contig_W82_mismatch 54.9 - 55.58 No other positions