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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Soybean-LG
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps H
Start
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Contig_W82
Contig_W82_mismatch
Marker_BARCssr
Marker_BARCssr_confirmed
Marker_RFLP
Marker_SSR-from-BAC
Marker_SSR-from-BAC_confirmed
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
map_based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Soybean - LG [ View Map Set Info ]
Map Name: H
Map Start: 0 cM
Map Stop: 124.66 cM
Features by Type:
13 Contig_W82
29 Contig_W82_mismatch
9 Marker_BARCssr
2 Marker_BARCssr_confirmed
13 Marker_RFLP
2 Marker_SSR-from-BAC
7 Marker_SSR-from-BAC_confirmed
75 Total

Map Features

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Items 1 to 25 of 75.       of 3 | Next
Soybean - LG - H
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
WmFPC_Contig181 Contig_W82_mismatch 33.6 - 66.1 No other positions
H_m_SSR0316_1 Marker_SSR-from-BAC_confirmed 66.1 Soybean - CONTIG - WmFPC_Contig181 H_m_SSR0316_1 Marker_SSR-from-BAC_confirmed 5.13 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - H SSR0316_1 SSR 66.1 (cM) Automated name-based View Maps
WmFPC_Contig201 Contig_W82_mismatch 62.09 - 64.71 No other positions
H_m_SSR2951_1 Marker_SSR-from-BAC_confirmed 63.4 Soybean - GmComposite2003 - H SSR2951_1 SSR 63.4 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig201 H_m_SSR2951_1 Marker_SSR-from-BAC_confirmed 1.5 (cM) Automated name-based View Maps
WmFPC_Contig240 Contig_W82_mismatch 100.81 - 107.92 No other positions
WmFPC_Contig271 Contig_W82_mismatch 70.45 - 73.91 No other positions
WmFPC_Contig345 Contig_W82_mismatch 63.02 - 65.16 No other positions
WmFPC_Contig353 Contig_W82_mismatch 102.65 - 106.09 No other positions
WmFPC_Contig421 Contig_W82_mismatch 62.01 - 66.17 No other positions
WmFPC_Contig551 Contig_W82_mismatch 100.79 - 107.95 No other positions
WmFPC_Contig709 Contig_W82_mismatch 65.42 - 66.97 No other positions
H_m_Sat_401_1 Marker_BARCssr 66.2 Soybean - CONTIG - WmFPC_Contig709 H_m2_Sat_401_1 Marker_BARCssr 0.4 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - H Sat_401 SSR 66.21 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - H Sat_401 SSR 66.2 (cM) Automated name-based View Maps
WmFPC_Contig851 Contig_W82_mismatch 58.48 - 65.33 No other positions
H_m_SSR3267_1 Marker_SSR-from-BAC 61.9 Soybean - GmComposite2003 - H SSR3267_1 SSR 61.9 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig851 H_m_SSR3267_1 Marker_SSR-from-BAC 2.4 (cM) Automated name-based View Maps
WmFPC_Contig895 Contig_W82_mismatch 66.94 - 71.3 No other positions
H_m_Satt314_1 Marker_BARCssr 69.12 Soybean - GmComposite2003 - H Satt314 SSR 69.12 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig895 H_m2_Satt314_1 Marker_BARCssr 3.92 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - H Satt314 SSR 69.11 (cM) Automated name-based View Maps
WmFPC_Contig933 Contig_W82_mismatch 102.61 - 106.14 No other positions
WmFPC_Contig1827 Contig_W82_mismatch 63.55 - 64.63 No other positions
WmFPC_Contig2056 Contig_W82_mismatch 59.67 - 60.73 No other positions
H_r_A404_1 Marker_RFLP 60.2 Soybean - CONTIG - WmFPC_Contig2151 H_r_A404_1 Marker_RFLP 0.41 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - H A404_1 RFLP 60.18 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig73 Unmapped_r_A404_103 Marker_RFLP 4.32 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - B2 A404_2 RFLP 110.7 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig172 Unmapped_r_A404_101 Marker_RFLP 2.4 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - B2 A404_2 RFLP 110.69 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - H A404_1 RFLP 60.19 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig2056 H_r_A404_1 Marker_RFLP 0.72 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - H A404T_3 RFLP 55.39 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig851 Unmapped_r_A404_105 Marker_RFLP 4.29 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig7798 Unmapped_r_A404_104 Marker_RFLP 0.74 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig2039 Unmapped_r_A404_102 Marker_RFLP 0.98 (cM) Automated name-based View Maps
WmFPC_Contig2151 Contig_W82_mismatch 59.74 - 60.66 No other positions
WmFPC_Contig3020 Contig_W82_mismatch 59.21 - 60.19 No other positions
H_m_SSR1509_1 Marker_SSR-from-BAC_confirmed 59.7 Soybean - GmComposite2003 - H SSR1509_1 SSR 59.7 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig3020 H_m_SSR1509_1 Marker_SSR-from-BAC_confirmed 0.27 (cM) Automated name-based View Maps
WmFPC_Contig3263 Contig_W82_mismatch 114.3 - 116.31 No other positions
H_r_A162_1 Marker_RFLP 115.3 Soybean - GmConsensus30 - H A162_1 RFLP 115.34 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - H A162_1 RFLP 115.33 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig3263 Unmapped_r_A162_101 Marker_RFLP 1.19 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig3263 H_r_A162_1 Marker_RFLP 1.5 (cM) Automated name-based View Maps