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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Soybean-LG
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps F
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Contig_W82
Contig_W82_mismatch
Marker_BARCssr
Marker_BARCssr_confirmed
Marker_RFLP
Marker_SSR-from-BAC
Marker_SSR-from-BAC_confirmed
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
map_based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Soybean - LG [ View Map Set Info ]
Map Name: F
Map Start: -1.38 cM
Map Stop: 141.32 cM
Features by Type:
16 Contig_W82
30 Contig_W82_mismatch
14 Marker_BARCssr
2 Marker_BARCssr_confirmed
5 Marker_RFLP
3 Marker_SSR-from-BAC
6 Marker_SSR-from-BAC_confirmed
76 Total

Map Features

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Items 1 to 25 of 76.       of 4 | Next
Soybean - LG - F
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
WmFPC_Contig166 Contig_W82_mismatch 9.18 - 11.82 No other positions
F_m_SSR2387_1 Marker_SSR-from-BAC 10.5 Soybean - CONTIG - WmFPC_Contig166 F_m_SSR2387_1 Marker_SSR-from-BAC 1.21 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - F SSR2387_1 SSR 10.5 (cM) Automated name-based View Maps
WmFPC_Contig265 Contig_W82_mismatch 46.9 - 47.6 No other positions
F_r_Mng228_1 Marker_RFLP 46.9 Soybean - GmComposite2003 - F Mng228_1 RFLP 46.91 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig325 F_r_Mng228_1 Marker_RFLP 4.14 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig1127 F_r_Mng228_1 Marker_RFLP 1.06 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - F Mng228_1 RFLP 46.92 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig7798 F_r_Mng228_1 Marker_RFLP 3.78 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig265 F_r_Mng228_1 Marker_RFLP 2.42 (cM) Automated name-based View Maps
F_r_K002_1 Marker_RFLP 47.6 Soybean - GmComposite2003 - F K002_1 RFLP 47.63 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - F K002_1 RFLP 47.63 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig265 F_r_K002_1 Marker_RFLP 2.42 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig1127 F_r_K002_1 Marker_RFLP 1.06 (cM) Automated name-based View Maps
WmFPC_Contig312 Contig_W82_mismatch 1.79 - 6.31 No other positions
F_m_SSR2282_1 Marker_SSR-from-BAC_confirmed 6.31 Soybean - GmComposite2003 - F SSR2282_1 SSR 6.31 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig312 F_m_SSR2282_1 Marker_SSR-from-BAC_confirmed 2.84 (cM) Automated name-based View Maps
WmFPC_Contig323 Contig_W82_mismatch 0.35 - 3.49 No other positions
F_m_Satt146_1 Marker_BARCssr_confirmed 1.92 Soybean - CONTIG - WmFPC_Contig323 F_m_Satt146_1 Marker_BARCssr_confirmed 1.99 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - F Satt146 SSR 1.92 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig756 F_m_Satt146_1 Marker_BARCssr_confirmed 1.36 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - F Satt146 SSR 1.92 (cM) Automated name-based View Maps
WmFPC_Contig325 Contig_W82_mismatch 43.3 - 50.51 No other positions
WmFPC_Contig396 Contig_W82_mismatch 3.95 - 8.76 No other positions
F_m_Satt030_1 Marker_BARCssr 3.95 Soybean - GmComposite2003 - F Satt030 SSR 3.95 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - F Satt030 SSR 3.95 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig396 F_m2_Satt030_1 Marker_BARCssr 1.82 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig751 F_m2_Satt030_1 Marker_BARCssr 1.31 (cM) Automated name-based View Maps
F_m_SSR2892_1 Marker_SSR-from-BAC_confirmed 8.76 Soybean - CONTIG - WmFPC_Contig396 F_m_SSR2892_1 Marker_SSR-from-BAC_confirmed 2.29 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - F SSR2892_1 SSR 8.76 (cM) Automated name-based View Maps
WmFPC_Contig462 Contig_W82_mismatch 67.86 - 69.95 No other positions
WmFPC_Contig709 Contig_W82_mismatch 74.72 - 76.28 No other positions
F_r_A059_3 Marker_RFLP 75.5 Soybean - GmComposite2003 - C1 A059_1 RFLP 18.62 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - C2 A059_2 RFLP 21.72 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig709 F_r_A059_3 Marker_RFLP 0.64 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - C1 A059_1 RFLP 18.62 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - C2 A059_2 RFLP 21.71 (cM) Automated name-based View Maps
WmFPC_Contig751 Contig_W82_mismatch 2.28 - 5.62 No other positions
WmFPC_Contig756 Contig_W82_mismatch 1.92 - 130.63 No other positions
WmFPC_Contig1119 Contig_W82_mismatch 1.55 - 4.57 No other positions
F_m_SSR1832_1 Marker_SSR-from-BAC_confirmed 3.06 Soybean - GmComposite2003 - F SSR1832_1 SSR 3.06 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig1119 F_m_SSR1832_1 Marker_SSR-from-BAC_confirmed 0.3 (cM) Automated name-based View Maps
WmFPC_Contig1127 Contig_W82_mismatch 46.9 - 47.6 No other positions
WmFPC_Contig2084 Contig_W82_mismatch 17.31 - 23.79 No other positions
WmFPC_Contig2567 Contig_W82_mismatch 65.59 - 72.22 No other positions
WmFPC_Contig3060 Contig_W82_mismatch 17.11 - 19.12 No other positions
F_m_Satt149_1 Marker_BARCssr 18.12 Soybean - CONTIG - WmFPC_Contig7843 F_m2_Satt149_1 Marker_BARCssr 2.15 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig3060 F_m2_Satt149_1 Marker_BARCssr 0.24 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - F Satt149 SSR 18.12 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - F Satt149 SSR 18.12 (cM) Automated name-based View Maps