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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Soybean-LG
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps D2
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Contig_W82
Contig_W82_mismatch
Marker_BARCssr
Marker_BARCssr_confirmed
Marker_RFLP
Marker_SSR-from-BAC
Marker_SSR-from-BAC_confirmed
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
map_based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Soybean - LG [ View Map Set Info ]
Map Name: D2
Map Start: 0 cM
Map Stop: 130 cM
Features by Type:
27 Contig_W82
33 Contig_W82_mismatch
22 Marker_BARCssr
5 Marker_BARCssr_confirmed
2 Marker_RFLP
2 Marker_SSR-from-BAC
11 Marker_SSR-from-BAC_confirmed
102 Total

Map Features

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Items 1 to 25 of 102.       of 5 | Next
Soybean - LG - D2
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
WmFPC_Contig1419 Contig_W82 87.07 - 88.03 No other positions
D2_m_Sat_300_1 Marker_BARCssr 87.55 Soybean - CONTIG - WmFPC_Contig1419 D2_m2_Sat_300_1 Marker_BARCssr 0.57 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - D2 Sat_300 SSR 87.55 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig2049 D2_m2_Sat_300_1 Marker_BARCssr 2.15 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - D2 Sat_300 SSR 87.56 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig756 D2_m2_Sat_300_1 Marker_BARCssr 6.88 (cM) Automated name-based View Maps
WmFPC_Contig1443 Contig_W82 85.58 - 87.08 No other positions
D2_m_Satt528_1 Marker_BARCssr 86.33 Soybean - GmConsensus30 - D2 Satt528 SSR 86.34 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig756 D2_m2_Satt528_1 Marker_BARCssr 7.66 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - D2 Satt528 SSR 86.33 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig1443 D2_m2_Satt528_1 Marker_BARCssr 0.28 (cM) Automated name-based View Maps
WmFPC_Contig1945 Contig_W82 103.68 - 104.32 No other positions
D2_m_SSR0955_1 Marker_SSR-from-BAC_confirmed 104 Soybean - GmComposite2003 - D2 SSR0955_1 SSR 104 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig1945 D2_m_SSR0955_1 Marker_SSR-from-BAC_confirmed 0.38 (cM) Automated name-based View Maps
WmFPC_Contig2111 Contig_W82 85.1 - 86.28 No other positions
D2_m_Satt514_1 Marker_BARCssr 85.69 Soybean - GmComposite2003 - D2 Satt514 SSR 85.69 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig1697 D2_m2_Satt514_1 Marker_BARCssr 1.18 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig2111 D2_m2_Satt514_1 Marker_BARCssr 0.64 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - D2 Satt514 SSR 85.69 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig756 D2_m2_Satt514_1 Marker_BARCssr 6.85 (cM) Automated name-based View Maps
WmFPC_Contig2169 Contig_W82 90.47 - 91.92 No other positions
D2_m_Satt615_1 Marker_BARCssr 91.2 Soybean - CONTIG - WmFPC_Contig7853 D2_m2_Satt615_1 Marker_BARCssr 0.88 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig2169 D2_m2_Satt615_1 Marker_BARCssr 0.44 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - D2 Satt615 SSR 91.2 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - D2 Satt615 SSR 91.21 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig509 D2_m2_Satt615_1 Marker_BARCssr 0.42 (cM) Automated name-based View Maps
WmFPC_Contig2364 Contig_W82 34.8 - 35.41 No other positions
D2_m_SSR1909_1 Marker_SSR-from-BAC_confirmed 35.1 Soybean - CONTIG - WmFPC_Contig2364 D2_m_SSR1909_1 Marker_SSR-from-BAC_confirmed 0.34 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - D2 SSR1909_1 SSR 35.1 (cM) Automated name-based View Maps
WmFPC_Contig3297 Contig_W82 75.11 - 76.28 No other positions
D2_m_SSR0086_1 Marker_SSR-from-BAC_confirmed 75.7 Soybean - GmComposite2003 - D2 SSR0086_1 SSR 75.7 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig3297 D2_m_SSR0086_1 Marker_SSR-from-BAC_confirmed 0.92 (cM) Automated name-based View Maps
WmFPC_Contig3371 Contig_W82 68.15 - 69.05 No other positions
D2_r_A708_2 Marker_RFLP 68.6 Soybean - GmComposite2003 - F A708_1 RFLP 84.16 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - F A708_1 RFLP 84.17 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig3371 D2_r_A708_2 Marker_RFLP 0.46 (cM) Automated name-based View Maps
WmFPC_Contig4368 Contig_W82 83.94 - 84.42 No other positions
D2_m_Sat_114_1 Marker_BARCssr 84.18 Soybean - GmConsensus30 - D2 Sat_114 SSR 84.18 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - D2 Sat_114 SSR 84.18 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig4368 D2_m2_Sat_114_1 Marker_BARCssr 0.28 (cM) Automated name-based View Maps
WmFPC_Contig4665 Contig_W82 16.33 - 17.19 No other positions
D2_m_Satt328_1 Marker_BARCssr_confirmed 16.76 Soybean - CONTIG - WmFPC_Contig7466 D2_m_Satt328_1 Marker_BARCssr_confirmed 1.92 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig1035 D2_m_Satt328_1 Marker_BARCssr_confirmed 1.09 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig6731 D2_m_Satt328_1 Marker_BARCssr_confirmed 0.46 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - D2 Satt328 SSR 16.76 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig1532 D2_m_Satt328_1 Marker_BARCssr_confirmed 0.9 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig539 D2_m_Satt328_1 Marker_BARCssr_confirmed 5.62 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - D2 Satt328 SSR 16.76 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig225 D2_m_Satt328_1 Marker_BARCssr_confirmed 2.97 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig4665 D2_m_Satt328_1 Marker_BARCssr_confirmed 0.44 (cM) Automated name-based View Maps
WmFPC_Contig4978 Contig_W82 89.41 - 90.09 No other positions
D2_m_Satt464_1 Marker_BARCssr_confirmed 89.75 Soybean - CONTIG - WmFPC_Contig4978 D2_m_Satt464_1 Marker_BARCssr_confirmed 0.18 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - D2 Satt464 SSR 89.75 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - D2 Satt464 SSR 89.75 (cM) Automated name-based View Maps
WmFPC_Contig5343 Contig_W82 11.55 - 11.98 No other positions
D2_m_Sct_192_1 Marker_BARCssr 11.77 Soybean - GmConsensus30 - D2 Sct_192 SSR 11.77 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig5343 D2_m2_Sct_192_1 Marker_BARCssr 0.26 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig2285 D2_m2_Sct_192_1 Marker_BARCssr 0.5 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - D2 Sct_192 SSR 11.77 (cM) Automated name-based View Maps
WmFPC_Contig6731 Contig_W82 15.91 - 17.61 No other positions