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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Soybean-LG
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps D1b
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Contig_W82
Contig_W82_mismatch
Marker_BARCssr
Marker_BARCssr_confirmed
Marker_RFLP
Marker_SSR-from-BAC
Marker_SSR-from-BAC_confirmed
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
map_based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Soybean - LG [ View Map Set Info ]
Map Name: D1b
Map Start: 0 cM
Map Stop: 137.29 cM
Features by Type:
17 Contig_W82
30 Contig_W82_mismatch
13 Marker_BARCssr
4 Marker_BARCssr_confirmed
2 Marker_RFLP
2 Marker_SSR-from-BAC
4 Marker_SSR-from-BAC_confirmed
72 Total

Map Features

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Items 1 to 25 of 72.       of 3 | Next
Soybean - LG - D1b
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
WmFPC_Contig163 Contig_W82_mismatch 70.61 - 81.27 No other positions
WmFPC_Contig322 Contig_W82_mismatch 51.03 - 55.01 No other positions
WmFPC_Contig335 Contig_W82_mismatch 68.33 - 72.97 No other positions
WmFPC_Contig356 Contig_W82_mismatch 73.66 - 78.89 No other positions
WmFPC_Contig400 Contig_W82_mismatch 74.92 - 77.61 No other positions
WmFPC_Contig1027 Contig_W82_mismatch 49.62 - 56.41 No other positions
WmFPC_Contig1043 Contig_W82_mismatch 38.04 - 76.27 No other positions
D1b_m_Satt698_1 Marker_BARCssr 38.04 Soybean - CONTIG - WmFPC_Contig1043 D1b_m2_Satt698_1 Marker_BARCssr 1.21 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - D1b Satt698 SSR 38.04 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - D1b Satt698 SSR 38.04 (cM) Automated name-based View Maps
WmFPC_Contig1125 Contig_W82_mismatch 86.7 - 87.68 No other positions
D1b_m_Satt546_1 Marker_BARCssr_confirmed 87.19 Soybean - GmConsensus30 - D1b Satt546 SSR 87.2 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - D1b Satt546 SSR 87.19 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig1125 D1b_m_Satt546_1 Marker_BARCssr_confirmed 0.28 (cM) Automated name-based View Maps
WmFPC_Contig1532 Contig_W82_mismatch 24.73 - 26.46 No other positions
WmFPC_Contig2385 Contig_W82_mismatch 117.62 - 118.38 No other positions
D1b_m_SSR0767_1 Marker_SSR-from-BAC 118 Soybean - GmComposite2003 - D1b SSR0767_1 SSR 118 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig2385 D1b_m_SSR0767_1 Marker_SSR-from-BAC 0.52 (cM) Automated name-based View Maps
WmFPC_Contig2481 Contig_W82_mismatch 83.08 - 85 No other positions
D1b_m_Satt041_1 Marker_BARCssr 84.04 Soybean - GmComposite2003 - D1b Satt041 SSR 84.04 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - D1b Satt041 SSR 84.04 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig2481 D1b_m2_Satt041_1 Marker_BARCssr 1.51 (cM) Automated name-based View Maps
WmFPC_Contig3227 Contig_W82_mismatch 52.6 - 53.44 No other positions
WmFPC_Contig3420 Contig_W82_mismatch 76.7 - 78.39 No other positions
D1b_r_Mng137_1 Marker_RFLP 77.55 Soybean - CONTIG - WmFPC_Contig3420 D1b_r_Mng137_1 Marker_RFLP 1.29 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig1035 Unmapped_r_Mng137_101 Marker_RFLP 1.31 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - D1b Mng137_1 RFLP 77.56 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - D1b Mng137_1 RFLP 77.55 (cM) Automated name-based View Maps
WmFPC_Contig3551 Contig_W82_mismatch 98.27 - 99.23 No other positions
WmFPC_Contig5622 Contig_W82_mismatch 120.39 - 132.49 No other positions
WmFPC_Contig6136 Contig_W82_mismatch 75.94 - 76.27 No other positions
WmFPC_Contig6722 Contig_W82_mismatch 50.42 - 55.62 No other positions
WmFPC_Contig7308 Contig_W82_mismatch 111.6 - 128.4 No other positions
D1b_m_SSR3407_1 Marker_SSR-from-BAC_confirmed 120 Soybean - GmComposite2003 - D1b SSR3407_1 SSR 120 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig7308 D1b_m_SSR3407_1 Marker_SSR-from-BAC_confirmed 14.3 (cM) Automated name-based View Maps
WmFPC_Contig7350 Contig_W82_mismatch 122.42 - 130.46 No other positions