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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Soybean-LG
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps B1
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Contig_W82
Contig_W82_mismatch
Marker_BARCssr
Marker_BARCssr_confirmed
Marker_RFLP
Marker_SSR-from-BAC
Marker_SSR-from-BAC_confirmed
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
map_based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Soybean - LG [ View Map Set Info ]
Map Name: B1
Map Start: 0 cM
Map Stop: 127 cM
Features by Type:
15 Contig_W82
19 Contig_W82_mismatch
8 Marker_BARCssr
1 Marker_BARCssr_confirmed
2 Marker_RFLP
2 Marker_SSR-from-BAC
8 Marker_SSR-from-BAC_confirmed
55 Total

Map Features

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Items 1 to 25 of 55.       of 3 | Next
Soybean - LG - B1
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
WmFPC_Contig345 Contig_W82_mismatch 48.63 - 50.77 No other positions
B1_m_SSR0512_1 Marker_SSR-from-BAC_confirmed 49.7 Soybean - GmComposite2003 - B1 SSR0512_1 SSR 49.7 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig345 B1_m_SSR0512_1 Marker_SSR-from-BAC_confirmed 1.16 (cM) Automated name-based View Maps
WmFPC_Contig348 Contig_W82_mismatch 116.36 - 120.68 No other positions
B1_m_Satt484_1 Marker_BARCssr 118.52 Soybean - GmComposite2003 - B1 Satt484 SSR 118.52 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig2679 B1_m2_Satt484_1 Marker_BARCssr 0.36 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig7593 B1_m2_Satt484_1 Marker_BARCssr 2.01 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig348 B1_m2_Satt484_1 Marker_BARCssr 1.82 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - B1 Satt484 SSR 118.53 (cM) Automated name-based View Maps
WmFPC_Contig464 Contig_W82_mismatch 78.93 - 82.67 No other positions
B1_m_SSR4033_1 Marker_SSR-from-BAC_confirmed 80.8 Soybean - CONTIG - WmFPC_Contig464 B1_m_SSR4033_1 Marker_SSR-from-BAC_confirmed 3.21 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - B1 SSR4033_1 SSR 80.8 (cM) Automated name-based View Maps
WmFPC_Contig1027 Contig_W82_mismatch 79.48 - 86.28 No other positions
WmFPC_Contig2012 Contig_W82_mismatch 14.83 - 17.37 No other positions
B1_r_Bng061_1 Marker_RFLP 16.1 Soybean - GmComposite2003 - B1 Bng061_1 RFLP 16.1 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - B1 Bng061_1 RFLP 16.1 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig403 Unmapped_r_Bng061_102 Marker_RFLP 0.82 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig155 Unmapped_r_Bng061_101 Marker_RFLP 0.08 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig2012 B1_r_Bng061_1 Marker_RFLP 0.87 (cM) Automated name-based View Maps
WmFPC_Contig2679 Contig_W82_mismatch 118.02 - 119.03 No other positions
WmFPC_Contig6722 Contig_W82_mismatch 78.7 - 83.9 No other positions
WmFPC_Contig7593 Contig_W82_mismatch 116.61 - 120.43 No other positions
WmFPC_Contig7798 Contig_W82_mismatch 76 - 80.88 No other positions
B1_m_SSR0208_1 Marker_SSR-from-BAC_confirmed 76 Soybean - GmComposite2003 - B1 SSR0208_1 SSR 76 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig7798 B1_m_SSR0208_1 Marker_SSR-from-BAC_confirmed 2.48 (cM) Automated name-based View Maps
WmFPC_Contig2034 Contig_W82 38.28 - 39.12 No other positions
B1_r_A632_1 Marker_RFLP 38.7 Soybean - CONTIG - WmFPC_Contig4791 Unmapped_r_A632_101 Marker_RFLP 0.06 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - B1 A632_1 RFLP 38.68 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig4 B1_r_A632_1 Marker_RFLP 4.68 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - B1 A632_1 RFLP 38.68 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig2034 B1_r_A632_1 Marker_RFLP 0.14 (cM) Automated name-based View Maps
WmFPC_Contig2286 Contig_W82 83.58 - 84.8 No other positions
WmFPC_Contig2964 Contig_W82 81.67 - 82.14 No other positions
B1_m_Satt430_1 Marker_BARCssr 81.91 Soybean - CONTIG - WmFPC_Contig2964 B1_m2_Satt430_1 Marker_BARCssr 0.26 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig1678 B1_m2_Satt430_1 Marker_BARCssr 0.55 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - B1 Satt430 SSR 81.91 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - B1 Satt430 SSR 81.92 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig38 B1_m2_Satt430_1 Marker_BARCssr 0.22 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig48 B1_m2_Satt430_1 Marker_BARCssr 2.56 (cM) Automated name-based View Maps
WmFPC_Contig2966 Contig_W82 36.01 - 36.99 No other positions
B1_m_SSR3993_1 Marker_SSR-from-BAC_confirmed 36.5 Soybean - CONTIG - WmFPC_Contig2966 B1_m_SSR3993_1 Marker_SSR-from-BAC_confirmed 0.53 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - B1 SSR3993_1 SSR 36.5 (cM) Automated name-based View Maps
WmFPC_Contig3460 Contig_W82 11.7 - 12.51 No other positions
B1_m_SSR0802_1 Marker_SSR-from-BAC_confirmed 12.1 Soybean - CONTIG - WmFPC_Contig3460 B1_m_SSR0802_1 Marker_SSR-from-BAC_confirmed 0.44 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - B1 SSR0802_1 SSR 12.1 (cM) Automated name-based View Maps
WmFPC_Contig5619 Contig_W82 61.73 - 62.06 No other positions
B1_m_SSR0129_1 Marker_SSR-from-BAC_confirmed 61.9 Soybean - GmComposite2003 - B1 SSR0129_1 SSR 61.9 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig5619 B1_m_SSR0129_1 Marker_SSR-from-BAC_confirmed 0.16 (cM) Automated name-based View Maps