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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Soybean-GmComposite2003
(Reference Set)
Min.
Correspondences
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Maps J
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 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Gene
PCR
QTL_fungal
QTL_inorganic
QTL_insect
QTL_leaf-stem
QTL_misc
QTL_nematode
QTL_oil
QTL_other-seed
QTL_pod
QTL_protein
QTL_reprod-period
QTL_whole-plant
QTL_yield
RAPD
RFLP
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
map_based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Soybean - GmComposite2003 [ View Map Set Info ]
Map Name: J
Map Start: 0 cM
Map Stop: 97 cM
Features by Type:
7 Gene
3 PCR
18 QTL_fungal
1 QTL_inorganic
2 QTL_insect
21 QTL_leaf-stem
4 QTL_misc
10 QTL_nematode
12 QTL_oil
16 QTL_other-seed
14 QTL_pod
5 QTL_protein
6 QTL_reprod-period
9 QTL_whole-plant
11 QTL_yield
2 RAPD
49 RFLP
72 SNP
55 SSR
317 Total

Map Features

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Items 1 to 25 of 317.       of 13 | Next
Soybean - GmComposite2003 - J
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BSR 1-1 QTL_fungal 67.3 - 69.3 No other positions
BSR 1-2 QTL_fungal 53.8 - 55.8 No other positions
BSR 3-1 QTL_fungal 77.8 - 79.8 No other positions
BSR 4-1 QTL_fungal 77.80001 - 79.8 No other positions
BSR 5-1 QTL_fungal 61.19 - 63.19 No other positions
BSR 5-2 QTL_fungal 66.79 - 68.79 No other positions
BSR 6-1 QTL_fungal 64.04 - 66.04 No other positions
BSR 6-10 QTL_fungal 64.0401 - 66.04 No other positions
BSR 6-2 QTL_fungal 64.04009 - 66.04 No other positions
BSR 6-3 QTL_fungal 64.04008 - 66.04 No other positions
BSR 6-4 QTL_fungal 64.04007 - 66.04 No other positions
BSR 6-5 QTL_fungal 64.04006 - 66.04 No other positions
BSR 6-6 QTL_fungal 64.04005 - 66.04 No other positions
BSR 6-7 QTL_fungal 64.04004 - 66.04 No other positions
BSR 6-8 QTL_fungal 64.04003 - 66.04 No other positions
BSR 6-9 QTL_fungal 64.04002 - 66.04 No other positions
Phytoph 7-1 QTL_fungal 37.04 - 39.63 No other positions
Phytoph 8-1 QTL_fungal 35.83 - 41.9 No other positions
Al tolerance 1-5 QTL_inorganic 56.2 - 58.2 No other positions
Corn earworm 6-2 QTL_insect 14.6 - 16.5 No other positions
Corn earworm 7-4 QTL_insect 19.8 - 21.8 No other positions
Leaflet area 5-1 QTL_leaf-stem 14.69 - 16.69 No other positions
Leaflet ash 1-3 QTL_leaf-stem 67.3 - 69.3 No other positions
Leaflet length 4-1 QTL_leaf-stem 67.3 - 69.3 No other positions
Leaflet length 8-2 QTL_leaf-stem 38.6 - 40.6 No other positions