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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Soybean-GmComposite2003
(Reference Set)
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Correspondences
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Maps I
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Gene
PCR
QTL_fungal
QTL_inorganic
QTL_insect
QTL_leaf-stem
QTL_misc
QTL_nematode
QTL_oil
QTL_other-seed
QTL_pod
QTL_protein
QTL_reprod-period
QTL_root
QTL_whole-plant
QTL_yield
RAPD
RFLP
SNP
SSR
Other
 
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Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
map_based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Soybean - GmComposite2003 [ View Map Set Info ]
Map Name: I
Map Start: 0 cM
Map Stop: 150.5 cM
Features by Type:
3 Gene
2 PCR
4 QTL_fungal
7 QTL_inorganic
1 QTL_insect
5 QTL_leaf-stem
1 QTL_misc
4 QTL_nematode
28 QTL_oil
21 QTL_other-seed
9 QTL_pod
19 QTL_protein
4 QTL_reprod-period
1 QTL_root
12 QTL_whole-plant
9 QTL_yield
2 RAPD
32 RFLP
53 SNP
59 SSR
276 Total

Map Features

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Items 1 to 25 of 276.       of 12 | Next
Soybean - GmComposite2003 - I
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Phytoph 8-2 QTL_fungal 34.94 - 53.14 No other positions
Sclero 2-15 QTL_fungal 19.34 - 21.34 No other positions
Sclero 7-3 QTL_fungal 25.52 - 40.52 No other positions
SDS 7-6 QTL_fungal 45.22 - 47.22 No other positions
Fe effic 10-1 QTL_inorganic 44 - 64.9 No other positions
Fe effic 11-2 QTL_inorganic 44.00009 - 64.9 No other positions
Fe effic 12-1 QTL_inorganic 44.00008 - 64.9 No other positions
Fe effic 13-3 QTL_inorganic 64.62 - 66.62 No other positions
Fe effic 4-2 QTL_inorganic 44.00007 - 64.9 No other positions
Fe effic 6-1 QTL_inorganic 44.00006 - 64.9 No other positions
Necrosis, root Mn induced 1-1 QTL_inorganic 35.94 - 37.94 No other positions
Bean pyralid 1-8 QTL_insect 24.75 - 42.35 No other positions
Leaflet area 1-3 QTL_leaf-stem 35.94 - 37.94 No other positions
Leaflet chlorophyll 1-15 QTL_leaf-stem 21.9 - 46.22 No other positions
Leaflet length 7-9 QTL_leaf-stem 17.5 - 19.5 No other positions
Leaflet shape 6-9 QTL_leaf-stem 111.7 - 113.7 No other positions
Leaflet shape 7-7 QTL_leaf-stem 17.5 - 19.5 No other positions
Drought index 1-4 QTL_misc 63.33 - 74.26 No other positions
SCN 12-1 QTL_nematode 37.06 - 39.06 No other positions
SCN 34-2 QTL_nematode 55.92 - 77.83 No other positions
SCN 34-4 QTL_nematode 91.62 - 109.92 No other positions
SCN 39-12 QTL_nematode 99.83 - 102.03 No other positions
cqSeed oil-004 QTL_oil 35.4 - 37.4 No other positions
cqSeed protein-003 QTL_oil 35.4 - 37.4 No other positions
cqSeed weight-003 QTL_oil 35.4 - 37.4 No other positions