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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Soybean-GmComposite2003
(Reference Set)
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Correspondences
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Maps F
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Gene
PCR
QTL_fungal
QTL_inorganic
QTL_insect
QTL_leaf-stem
QTL_nematode
QTL_oil
QTL_other-seed
QTL_pod
QTL_protein
QTL_reprod-period
QTL_root
QTL_viral
QTL_whole-plant
QTL_yield
RAPD
RFLP
SNP
SSR
Other
 
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Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
map_based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Soybean - GmComposite2003 [ View Map Set Info ]
Map Name: F
Map Start: -0.41 cM
Map Stop: 150.97 cM
Features by Type:
9 Gene
5 PCR
24 QTL_fungal
4 QTL_inorganic
4 QTL_insect
16 QTL_leaf-stem
14 QTL_nematode
16 QTL_oil
26 QTL_other-seed
8 QTL_pod
12 QTL_protein
5 QTL_reprod-period
1 QTL_root
1 QTL_viral
30 QTL_whole-plant
12 QTL_yield
4 RAPD
50 RFLP
72 SNP
76 SSR
389 Total

Map Features

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Items 1 to 25 of 389.       of 16 | Next
Soybean - GmComposite2003 - F
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Fusarium lesion length 1-2 QTL_fungal 27.46 - 30.26 No other positions
Phomopsis seed decay 1-1 QTL_fungal 83.17 - 85.17 No other positions
Phomopsis seed decay 2-1 QTL_fungal 83.17001 - 85.17 No other positions
Phytoph 1-1 QTL_fungal 16.08 - 20.56 No other positions
Phytoph 10-1 QTL_fungal 0 - 5.05 No other positions
Phytoph 10-2 QTL_fungal 3.04 - 5.56 No other positions
Phytoph 11-19 QTL_fungal 32.18 - 34.18 No other positions
Phytoph 11-21 QTL_fungal 73.12 - 75.12 No other positions
Phytoph 12-1 QTL_fungal 74.12 - 79.91 No other positions
Phytoph 2-1 QTL_fungal 16.08003 - 18.13 No other positions
Phytoph 3-1 QTL_fungal 16.08002 - 20.56 No other positions
Phytoph 4-1 QTL_fungal 16.08001 - 18.13 No other positions
Phytoph 6-1 QTL_fungal 2.23 - 3.04 No other positions
Phytoph 8-4 QTL_fungal 63.68 - 71.41 No other positions
Phytoph 9-2 QTL_fungal 18.12 - 33.18 No other positions
Phytoph 9-3 QTL_fungal 71.41 - 74.12 No other positions
Sclero 2-12 QTL_fungal 62.69 - 64.69 No other positions
Sclero 3-9 QTL_fungal 62.69032 - 64.69 No other positions
Sclero 4-4 QTL_fungal 62.69031 - 64.69 No other positions
Sclero 5-6 QTL_fungal 62.6903 - 64.69 No other positions
Sclero 5-7 QTL_fungal 71.5 - 77.7 No other positions
Sclero 6-5 QTL_fungal 62.69029 - 64.69 No other positions
Sclero 6-6 QTL_fungal 70.41 - 72.41 No other positions
Sclero 9-5 QTL_fungal 18.12 - 21.04 No other positions
Al tolerance 1-4 QTL_inorganic 66.2 - 68.2 No other positions