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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Soybean-GmComposite2003
(Reference Set)
Min.
Correspondences
Align Vertically
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Maps C1
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
AFLP
Gene
Marker
QTL_fungal
QTL_inorganic
QTL_insect
QTL_leaf-stem
QTL_misc
QTL_nematode
QTL_oil
QTL_other-seed
QTL_pod
QTL_protein
QTL_reprod-period
QTL_root
QTL_whole-plant
QTL_yield
RFLP
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
map_based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Soybean - GmComposite2003 [ View Map Set Info ]
Map Name: C1
Map Start: -1 cM
Map Stop: 136.06 cM
Features by Type:
1 AFLP
4 Gene
2 Marker
2 QTL_fungal
2 QTL_inorganic
1 QTL_insect
3 QTL_leaf-stem
2 QTL_misc
6 QTL_nematode
8 QTL_oil
32 QTL_other-seed
10 QTL_pod
12 QTL_protein
4 QTL_reprod-period
1 QTL_root
9 QTL_whole-plant
13 QTL_yield
26 RFLP
55 SNP
58 SSR
251 Total

Map Features

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Items 1 to 25 of 251.       of 11 | Next
Soybean - GmComposite2003 - C1
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
SDS 13-15 QTL_fungal 57.3 - 83.9 No other positions
SDS 9-3 QTL_fungal 89.72 - 91.72 No other positions
Flood tolerance 4-8 QTL_inorganic 131.46 - 133.46 No other positions
Flood tolerance 7-3 QTL_inorganic 123.79 - 132.46 No other positions
Bean pyralid 1-3 QTL_insect 55.02 - 79.02 No other positions
Leaflet shape 8-3 QTL_leaf-stem 126.8 - 128.8 No other positions
Leaflet width 8-2 QTL_leaf-stem 126.8 - 128.8 No other positions
Stem strength, main 1-4 QTL_leaf-stem 41.43 - 65.08 No other positions
WUE 2-2 QTL_misc 89.7 - 91.7 No other positions
WUE 2-3 QTL_misc 89.70001 - 91.7 No other positions
SCN 18-3 QTL_nematode 21.04 - 24.11 No other positions
SCN 21-1 QTL_nematode 18.62 - 21.04 No other positions
SCN 36-6 QTL_nematode 28.04 - 41.43 No other positions
SCN 36-7 QTL_nematode 78.65 - 87.3 No other positions
SCN 36-8 QTL_nematode 5.36 - 26.35 No other positions
SCN 39-10 QTL_nematode 38.23 - 44.63 No other positions
cqSeed oil-001 QTL_oil 89.72 - 91.72 No other positions
Seed linolenic 6-2 QTL_oil 63.6 - 66.8 No other positions
Seed oil 20-1 QTL_oil 122.79 - 124.79 No other positions
Seed oil 24-18 QTL_oil 5.36 - 15.67 No other positions
Seed oil 29-1 QTL_oil 61.88 - 65.08 No other positions
Seed oil 6-1 QTL_oil 89.7 - 91.7 No other positions
Seed oil 8-2 QTL_oil 9.34 - 11.34 No other positions
Seed oil 9-1 QTL_oil 9.34004 - 11.34 No other positions
Seed protein 12-2 QTL_protein 32.3 - 34.3 No other positions