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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Soybean-GmComposite2003
(Reference Set)
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Correspondences
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Maps B2
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Gene
Marker
QTL_fungal
QTL_inorganic
QTL_insect
QTL_leaf-stem
QTL_misc
QTL_nematode
QTL_oil
QTL_other-seed
QTL_pod
QTL_protein
QTL_reprod-period
QTL_whole-plant
QTL_yield
RAPD
RFLP
SNP
SSR
Other
 
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Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
map_based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Soybean - GmComposite2003 [ View Map Set Info ]
Map Name: B2
Map Start: 0 cM
Map Stop: 124.97 cM
Features by Type:
4 Gene
2 Marker
5 QTL_fungal
9 QTL_inorganic
1 QTL_insect
6 QTL_leaf-stem
2 QTL_misc
5 QTL_nematode
25 QTL_oil
18 QTL_other-seed
5 QTL_pod
12 QTL_protein
1 QTL_reprod-period
8 QTL_whole-plant
5 QTL_yield
6 RAPD
49 RFLP
43 SNP
54 SSR
260 Total

Map Features

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Items 1 to 25 of 260.       of 11 | Next
Soybean - GmComposite2003 - B2
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Phytoph 11-22 QTL_fungal 64.55 - 66.55 No other positions
Phytoph 9-4 QTL_fungal 55.2 - 72.8 No other positions
Sclero 2-4 QTL_fungal 71.81 - 73.81 No other positions
Sclero 5-2 QTL_fungal 71.81044 - 73.81 No other positions
Sclero 8-2 QTL_fungal 21.25 - 33.99 No other positions
Chlorosis, leaflet Mn induced 1-1 QTL_inorganic 69.12 - 71.12 No other positions
Fe effic 10-3 QTL_inorganic 73 - 104.7 No other positions
Fe effic 11-1 QTL_inorganic 71.1 - 73.8 No other positions
Fe effic 3-1 QTL_inorganic 72.8 - 98.5 No other positions
Fe effic 3-2 QTL_inorganic 93.5 - 104.7 No other positions
Fe effic 4-1 QTL_inorganic 71.10015 - 73.8 No other positions
Fe effic 8-1 QTL_inorganic 72.13 - 98.5 No other positions
Fe effic 9-2 QTL_inorganic 93.50014 - 104.7 No other positions
Flood tolerance 4-5 QTL_inorganic 11.82 - 22.82 No other positions
Corn earworm 5-1 QTL_insect 20 - 38 No other positions
Leaflet length 10-3 QTL_leaf-stem 72.2 - 111.2 No other positions
Leaflet length 10-4 QTL_leaf-stem 55.2 - 71.68 No other positions
Leaflet shape 6-2 QTL_leaf-stem 72.2 - 74.2 No other positions
Leaflet shape 7-2 QTL_leaf-stem 92.5 - 94.5 No other positions
Leaflet width 7-1 QTL_leaf-stem 92.5 - 94.5 No other positions
Stem strength, main 1-3 QTL_leaf-stem 64.43 - 73.53 No other positions
Somatic emb per explant 3-1 QTL_misc 51.45 - 55.2 No other positions
Somatic emb per explant 3-2 QTL_misc 99.55 - 102.6 No other positions
SCN 10-1 QTL_nematode 97.54 - 99.54 No other positions
SCN 10-3 QTL_nematode 117.69 - 119.69 No other positions