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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Soybean-GmComposite2003
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps B1
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Gene
PCR
QTL_fungal
QTL_inorganic
QTL_leaf-stem
QTL_nematode
QTL_oil
QTL_other-seed
QTL_pod
QTL_protein
QTL_reprod-period
QTL_root
QTL_whole-plant
QTL_yield
RAPD
RFLP
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
map_based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Soybean - GmComposite2003 [ View Map Set Info ]
Map Name: B1
Map Start: 0 cM
Map Stop: 131.8 cM
Features by Type:
4 Gene
2 PCR
3 QTL_fungal
7 QTL_inorganic
6 QTL_leaf-stem
15 QTL_nematode
9 QTL_oil
29 QTL_other-seed
15 QTL_pod
6 QTL_protein
4 QTL_reprod-period
11 QTL_root
25 QTL_whole-plant
7 QTL_yield
1 RAPD
37 RFLP
39 SNP
47 SSR
267 Total

Map Features

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Items 1 to 25 of 267.       of 11 | Next
Soybean - GmComposite2003 - B1
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Phytoph 6-5 QTL_fungal 118.52 - 123.95 No other positions
Sclero 3-3 QTL_fungal 45.39 - 47.39 No other positions
SDS 13-8 QTL_fungal 5.07 - 16.7 No other positions
Al tolerance 1-2 QTL_inorganic 19 - 21 No other positions
Al tolerance 1-3 QTL_inorganic 39.1 - 41.1 No other positions
Al tolerance 3-1 QTL_inorganic 46.38 - 53.41 No other positions
Al tolerance 3-5 QTL_inorganic 46.38 - 53.41 No other positions
Al tolerance 3-7 QTL_inorganic 46.38 - 53.41 No other positions
Fe effic 9-1 QTL_inorganic 25.2 - 58.9 No other positions
Flood tolerance 4-4 QTL_inorganic 56.6 - 61.6 No other positions
Hypocotyl length 1-1 QTL_leaf-stem 10.9 - 12.9 No other positions
Leaflet length 6-1 QTL_leaf-stem 45.4 - 47.4 No other positions
Leaflet length 7-2 QTL_leaf-stem 45.40018 - 47.4 No other positions
Leaflet shape 8-2 QTL_leaf-stem 123 - 125 No other positions
Leaflet shape 9-2 QTL_leaf-stem 123.00016 - 125 No other positions
Leaflet weight, specific 1-1 QTL_leaf-stem 65.77 - 67.77 No other positions
SCN 17-1 QTL_nematode 84.19 - 100.99 No other positions
SCN 18-2 QTL_nematode 84.19031 - 100.99 No other positions
SCN 2-1 QTL_nematode 63.77 - 65.77 No other positions
SCN 2-2 QTL_nematode 124.98 - 126.98 No other positions
SCN 20-1 QTL_nematode 84.1903 - 100.99 No other positions
SCN 23-1 QTL_nematode 64.77 - 84.19 No other positions
SCN 24-1 QTL_nematode 64.77032 - 84.19 No other positions
SCN 26-1 QTL_nematode 58.91 - 64.77 No other positions
SCN 29-10 QTL_nematode 102.56 - 123.96 No other positions