CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Help | Tutorial


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Soybean-CONTIG
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps WmFPC_Contig9
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Clone_F.MTP
Clone_W82
Clone_W82_marker
Marker_BARCssr
Marker_BARCssr_confirmed
Marker_SSR-from-BAC
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
map_based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Soybean - CONTIG [ View Map Set Info ]
Map Name: WmFPC_Contig9
Map Start: 0 cM
Map Stop: 12.42 cM
Features by Type:
33 Clone_F.MTP
820 Clone_W82
48 Clone_W82_marker
5 Marker_BARCssr
1 Marker_BARCssr_confirmed
51 Marker_SSR-from-BAC
958 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 958.       of 39 | Next
Soybean - CONTIG - WmFPC_Contig9
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GM_WBb0097P02 Clone_W82 2.26 - 2.6 No other positions
GM_WBa0095F10 Clone_W82 3.17 - 3.47 No other positions
GM_WBc0086M05 Clone_W82 8.09 - 8.22 No other positions
GM_WBc0025F21 Clone_W82 3.32 - 3.5 No other positions
GM_WBb0076I12 Clone_W82 10.34 - 10.88 No other positions
GM_WBa0065N05 Clone_W82 0.85 - 1.08 No other positions
GM_WBa0074M14 Clone_W82 9.79 - 9.96 No other positions
GM_WBa0028G05 Clone_W82 1.58 - 1.83 No other positions
FB48J08 Clone_F.MTP 8.41 - 8.6 No other positions
Unmapped_m_SSR4638_101 Marker_SSR-from-BAC 4.94 No other positions
Unmapped_m_SSR0566_101 Marker_SSR-from-BAC 4.94 No other positions
F_m2_Satt656_1 Marker_BARCssr 4.94 Soybean - LG - F F_m_Satt656_1 Marker_BARCssr 135.11 (cM) Automated name-based View Maps
GM_WBb0020D18 Clone_W82_marker 4.77 - 5.11 No other positions
GM_WBb0103C02 Clone_W82 4.56 - 4.86 No other positions
GM_WBb0113O15 Clone_W82 5.7 - 6.02 No other positions
GM_WBb0037C16 Clone_W82 5.99 - 6.34 No other positions
GM_WBc0120E10 Clone_W82 10.92 - 11.1 No other positions
Unmapped_m_SSR7221_101 Marker_SSR-from-BAC 3.37 No other positions
GM_WBb0059N18 Clone_W82_marker 3.16 - 3.58 No other positions
GM_WBb0087K12 Clone_W82 11.17 - 11.55 No other positions
Unmapped_m_SSR3732_101 Marker_SSR-from-BAC 10.86 No other positions
GM_WBb0046F06 Clone_W82_marker 10.69 - 11.02 No other positions
GM_WBc0076J05 Clone_W82 5.65 - 5.87 No other positions
GM_WBb0087P05 Clone_W82 0.47 - 0.77 No other positions
GM_WBb0032A16 Clone_W82 4.07 - 4.35 No other positions