CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Help | Tutorial


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Soybean-CONTIG
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps WmFPC_Contig345
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Clone_F.MTP
Clone_W82
Clone_W82_marker
Marker_BARCssr
Marker_SSR-from-BAC
Marker_SSR-from-BAC_confirmed
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
map_based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Soybean - CONTIG [ View Map Set Info ]
Map Name: WmFPC_Contig345
Map Start: 0 cM
Map Stop: 2.14 cM
Features by Type:
4 Clone_F.MTP
63 Clone_W82
9 Clone_W82_marker
2 Marker_BARCssr
12 Marker_SSR-from-BAC
1 Marker_SSR-from-BAC_confirmed
91 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 91.       of 4 | Next
Soybean - CONTIG - WmFPC_Contig345
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Unmapped_m_SSR3675_101 Marker_SSR-from-BAC 0.93 No other positions
Unmapped_m_SSR4433_101 Marker_SSR-from-BAC 0.93 No other positions
Unmapped_m_SSR0037_101 Marker_SSR-from-BAC 0.93 No other positions
GM_WBb0031B13 Clone_W82_marker 0.7 - 1.16 No other positions
GM_WBb0131C01 Clone_W82 1.75 - 2.05 No other positions
GM_WBc0006O10 Clone_W82 0.56 - 0.92 No other positions
GM_WBc0078H18 Clone_W82 1.72 - 1.95 No other positions
GM_WBb0174M18 Clone_W82 1.52 - 1.74 No other positions
GM_WBc0013P06 Clone_W82 1.32 - 1.53 No other positions
GM_WBc0077O21 Clone_W82 1 - 1.21 No other positions
GM_WBc0084F14 Clone_W82 1.71 - 1.92 No other positions
FB16B19 Clone_F.MTP 1.35 - 1.51 No other positions
Unmapped_m_SSR4768_101 Marker_SSR-from-BAC 1.16 No other positions
Unmapped_m_SSR0513_101 Marker_SSR-from-BAC 1.16 No other positions
B1_m_SSR0512_1 Marker_SSR-from-BAC_confirmed 1.16 Soybean - LG - B1 B1_m_SSR0512_1 Marker_SSR-from-BAC_confirmed 49.7 (cM) Automated name-based View Maps
Unmapped_m_SSR0915_101 Marker_SSR-from-BAC 1.16 No other positions
Unmapped_m_SSR0914_101 Marker_SSR-from-BAC 1.16 No other positions
GM_WBb0065A15 Clone_W82_marker 1.01 - 1.3 No other positions
FH56F14 Clone_F.MTP 0.01 - 0.29 No other positions
GM_WBb0027M24 Clone_W82 0.23 - 0.5 No other positions
GM_WBb0167A13 Clone_W82 1.28 - 1.53 No other positions
GM_WBa0045I11 Clone_W82 1.55 - 1.73 No other positions
K_m2_Satt727_1 Marker_BARCssr 0.98 Soybean - LG - K K_m_Satt727_1 Marker_BARCssr 46.79 (cM) Automated name-based View Maps
GM_WBb0114H09 Clone_W82_marker 0.85 - 1.18 No other positions
GM_WBc0014L17 Clone_W82 1.05 - 1.26 No other positions