CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Help | Tutorial


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Soybean-Soybean-GmGWAS
(Reference Set)
Soybean-Soybean-GmComposite2003
Min.
Correspondences
Align Vertically
Stack
Maps L L
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Gene
Gene_model
QTL_fungal
QTL_inorganic
QTL_leaf-stem
QTL_misc
QTL_nematode
QTL_oil
QTL_other-seed
QTL_pod
QTL_protein
QTL_reprod-period
QTL_root
QTL_viral
QTL_whole-plant
QTL_yield
RAPD
RFLP
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
map_based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Soybean - Soybean-GmGWAS [ View Map Set Info ]
Map Name: L
Map Start: 0 cM
Map Stop: 50,733,768 cM
Features by Type:
2,642 Gene_model
8 QTL_fungal
7 QTL_inorganic
17 QTL_leaf-stem
5 QTL_misc
9 QTL_nematode
13 QTL_oil
13 QTL_other-seed
3 QTL_pod
9 QTL_protein
20 QTL_reprod-period
82 QTL_whole-plant
20 QTL_yield
205 SNP
44 SSR
3,097 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 3,097.       of 124 | Next
Soybean - Soybean-GmGWAS - L
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Plant height 3-g1 QTL_whole-plant 45,324,187 No other positions
Plant height 3-g2 QTL_whole-plant 45,266,572 No other positions
Plant height 3-g3 QTL_whole-plant 45,557,339 No other positions
Plant height 3-g4 QTL_whole-plant 45,642,661 No other positions
Plant height 3-g5 QTL_whole-plant 45,204,029 No other positions
Plant height 3-g6 QTL_whole-plant 45,370,182 No other positions
Plant height 3-g7 QTL_whole-plant 45,478,026 No other positions
Plant height 3-g9 QTL_whole-plant 44,964,716 No other positions
Plant height 3-g11 QTL_whole-plant 32,352,993 No other positions
Plant height 3-g15 QTL_whole-plant 39,924,241 No other positions
Plant height 3-g18 QTL_whole-plant 43,321,090 No other positions
Plant height 3-g19 QTL_whole-plant 42,660,205 No other positions
Leaf carotenoid content 1-g14 QTL_leaf-stem 47,187,424 No other positions
First flower 5-g3 QTL_reprod-period 43,183,481 No other positions
Interbranch length 1-g1.1 QTL_whole-plant 42,774,588 No other positions
Interbranch length 1-g1.2 QTL_whole-plant 45,203,169 No other positions
Interbranch length 1-g1.3 QTL_whole-plant 46,737,870 No other positions
Canopy width 1-g2.1 QTL_whole-plant 36,606,460 No other positions
Canopy width 1-g2.2 QTL_whole-plant 36,661,427 No other positions
Canopy width 1-g3.1 QTL_whole-plant 46,600,788 No other positions
Canopy width 1-g3.2 QTL_whole-plant 46,601,442 No other positions
Canopy width 1-g3.3 QTL_whole-plant 46,737,870 No other positions
First flower 5-g17 QTL_reprod-period 43,183,481 No other positions
Seed amino acids 1-g25.1 QTL_protein 44,806,855 No other positions
Seed amino acids 1-g25.2 QTL_protein 44,912,660 No other positions