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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Soybean-Soybean-GmGWAS
(Reference Set)
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Gene_model
QTL_fungal
QTL_inorganic
QTL_leaf-stem
QTL_misc
QTL_nematode
QTL_oil
QTL_other-seed
QTL_pod
QTL_protein
QTL_reprod-period
QTL_viral
QTL_whole-plant
QTL_yield
SNP
SSR
Other
 
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Features:		 No Yes
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Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
map_based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG GIF SVG *
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Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
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Correspondences
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Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Soybean - Soybean-GmGWAS [ View Map Set Info ]
Map Name: F
Map Start: 0 cM
Map Stop: 45,821,313 cM
Features by Type:
3,730 Gene_model
23 QTL_fungal
7 QTL_inorganic
11 QTL_leaf-stem
10 QTL_misc
7 QTL_nematode
17 QTL_oil
21 QTL_other-seed
2 QTL_pod
25 QTL_protein
18 QTL_reprod-period
3 QTL_viral
50 QTL_whole-plant
25 QTL_yield
230 SNP
52 SSR
4,231 Total

Map Features

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Items 1 to 25 of 4,231.       of 170 | Next
Soybean - Soybean-GmGWAS - F
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Seed protein 3-g16 QTL_protein 26,343,911 No other positions
Seed yield 3-g5 QTL_yield 30,157,326 No other positions
Leaf carotenoid content 1-g9 QTL_leaf-stem 25,779,102 No other positions
Leaf carotenoid content 1-g10 QTL_leaf-stem 29,790,648 No other positions
Leaflet chlorophyll 2-g1 QTL_leaf-stem 37,658,142 No other positions
Leaflet chlorophyll 2-g3.1 QTL_leaf-stem 33,185,039 No other positions
Leaflet chlorophyll 2-g3.2 QTL_leaf-stem 33,185,121 No other positions
Leaflet chlorophyll 2-g3.3 QTL_leaf-stem 33,304,202 No other positions
Seed long-chain fatty acid 1-g3.1 QTL_oil 14,070,515 No other positions
Seed long-chain fatty acid 1-g3.2 QTL_oil 14,109,681 No other positions
Seed long-chain fatty acid 1-g3.3 QTL_oil 14,114,485 No other positions
Flower color 2-g1.1 QTL_whole-plant 16,609,051 No other positions
Flower color 2-g1.2 QTL_whole-plant 17,307,394 No other positions
Flower color 2-g1.3 QTL_whole-plant 19,868,544 No other positions
First flower 5-g27.1 QTL_reprod-period 37,478,851 No other positions
First flower 5-g27.2 QTL_reprod-period 37,498,490 No other positions
Hilum color 2-g5.1 QTL_other-seed 30,062,400 No other positions
Hilum color 2-g5.2 QTL_other-seed 30,062,400 No other positions
Hilum color 2-g5.3 QTL_other-seed 30,062,400 No other positions
Seed amino acids 1-g4.1 QTL_protein 2,546,775 No other positions
Seed amino acids 1-g4.2 QTL_protein 2,546,862 No other positions
Seed amino acids 1-g7 QTL_protein 2,546,862 No other positions
Seed amino acids 1-g12.1 QTL_protein 2,546,775 No other positions
Seed amino acids 1-g12.2 QTL_protein 2,546,862 No other positions
Seed amino acids 1-g16 QTL_protein 2,546,862 No other positions