CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Help | Tutorial


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Soybean-LG
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps B2
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Contig_W82
Contig_W82_mismatch
Marker_BARCssr
Marker_BARCssr_confirmed
Marker_RFLP
Marker_SSR-from-BAC
Marker_SSR-from-BAC_confirmed
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
map_based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Soybean - LG [ View Map Set Info ]
Map Name: B2
Map Start: 0 cM
Map Stop: 114.42 cM
Features by Type:
17 Contig_W82
27 Contig_W82_mismatch
6 Marker_BARCssr
3 Marker_BARCssr_confirmed
7 Marker_RFLP
5 Marker_SSR-from-BAC
9 Marker_SSR-from-BAC_confirmed
74 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 74.       Previous | of 3 | Next
Soybean - LG - B2
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
B2_m_SSR0169_1 Marker_SSR-from-BAC 96.2 Soybean - GmComposite2003 - B2 SSR0169_1 SSR 96.2 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig7869 B2_m_SSR0169_1 Marker_SSR-from-BAC 0.55 (cM) Automated name-based View Maps
WmFPC_Contig565 Contig_W82 73.85 - 76.83 No other positions
B2_m_Satt474_1 Marker_BARCssr 75.34 Soybean - CONTIG - WmFPC_Contig565 B2_m2_Satt474_1 Marker_BARCssr 0.91 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - B2 Satt474 SSR 75.35 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - B2 Satt474 SSR 75.34 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig88 B2_m2_Satt474_1 Marker_BARCssr 3.16 (cM) Automated name-based View Maps
WmFPC_Contig1457 Contig_W82 110.8 - 111 No other positions
B2_r_A183_1 Marker_RFLP 110.8 Soybean - GmComposite2003 - B2 A183_1 RFLP 110.8 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig1457 B2_r_A183_1 Marker_RFLP 0.34 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - B2 A183_1 RFLP 110.81 (cM) Automated name-based View Maps
B2_r_A427_1 Marker_RFLP 111 Soybean - CONTIG - WmFPC_Contig73 Unmapped_r_A427_102 Marker_RFLP 1.46 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig3869 E_r_A427_3 Marker_RFLP 0.09 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig1758 Unmapped_r_A427_101 Marker_RFLP 0.28 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - B2 A427_1 RFLP 110.96 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig1457 B2_r_A427_1 Marker_RFLP 0.24 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - G A427_2 RFLP 58.7 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - G A427_2 RFLP 58.7 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - E A427_3 RFLP 48.75 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig11 B2_r_A427_1 Marker_RFLP 2.23 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - E A427_3 RFLP 48.75 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - B2 A427_1 RFLP 110.95 (cM) Automated name-based View Maps
WmFPC_Contig2047 Contig_W82 91.04 - 92.36 No other positions
B2_r_B194_1 Marker_RFLP 91.7 Soybean - GmComposite2003 - B2 B194_1 RFLP 91.69 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig2047 B2_r_B194_1 Marker_RFLP 0.56 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - B2 B194_1 RFLP 91.7 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig6136 B2_r_B194_1 Marker_RFLP 12.95 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - D1b B194_2 RFLP 88.36 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - D1b B194_2 RFLP 88.36 (cM) Automated name-based View Maps
WmFPC_Contig8 Contig_W82_mismatch 65.43 - 70.03 No other positions
B2_m_Satt601_1 Marker_BARCssr 67.73 Soybean - GmComposite2003 - B2 Satt601 SSR 67.73 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig8 B2_m2_Satt601_1 Marker_BARCssr 3.12 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig7833 B2_m2_Satt601_1 Marker_BARCssr 3.57 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - B2 Satt601 SSR 67.73 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig214 B2_m2_Satt601_1 Marker_BARCssr 2.01 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig166 B2_m2_Satt601_1 Marker_BARCssr 0.93 (cM) Automated name-based View Maps
WmFPC_Contig11 Contig_W82_mismatch 107.58 - 114.42 No other positions
WmFPC_Contig16 Contig_W82_mismatch 77.38 - 79.94 No other positions
B2_m_Sat_009_1 Marker_BARCssr_confirmed 78.66 Soybean - GmComposite2003 - B2 Sat_009 SSR 78.66 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig16 B2_m_Sat_009_1 Marker_BARCssr_confirmed 0.6 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - M Sat_003 SSR 62.31 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - B2 Sat_009 SSR 78.66 (cM) Automated name-based View Maps
WmFPC_Contig36 Contig_W82_mismatch 69.86 - 79.73 No other positions
B2_m_SSR1815_1 Marker_SSR-from-BAC_confirmed 74.8 Soybean - CONTIG - WmFPC_Contig36 B2_m_SSR1815_1 Marker_SSR-from-BAC_confirmed 3.46 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - B2 SSR1815_1 SSR 74.8 (cM) Automated name-based View Maps
WmFPC_Contig47 Contig_W82_mismatch 80.9 - 81.4 No other positions
B2_m_SSR0463_1 Marker_SSR-from-BAC 80.9 Soybean - CONTIG - WmFPC_Contig47 B2_m_SSR0463_1 Marker_SSR-from-BAC 1.31 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - B2 SSR0463_1 SSR 80.9 (cM) Automated name-based View Maps
B2_m_SSR0168_1 Marker_SSR-from-BAC_confirmed 81.4 Soybean - GmComposite2003 - B2 SSR0168_1 SSR 81.4 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig47 B2_m_SSR0168_1 Marker_SSR-from-BAC_confirmed 1.31 (cM) Automated name-based View Maps
WmFPC_Contig88 Contig_W82_mismatch 72.72 - 77.95 No other positions
WmFPC_Contig137 Contig_W82_mismatch 71.33 - 78.05 No other positions
B2_r_Mng003_1 Marker_RFLP 74.69 Soybean - GmComposite2003 - B2 Mng003_1 RFLP 74.69 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - B2 Mng003_1 RFLP 74.69 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig137 B2_r_Mng003_1 Marker_RFLP 4.04 (cM) Automated name-based View Maps
WmFPC_Contig144 Contig_W82_mismatch 61.05 - 67.75 No other positions
B2_m_SSR0337_1 Marker_SSR-from-BAC_confirmed 64.4 Soybean - GmComposite2003 - B2 SSR0337_1 SSR 64.4 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig144 B2_m_SSR0337_1 Marker_SSR-from-BAC_confirmed 5.46 (cM) Automated name-based View Maps
WmFPC_Contig166 Contig_W82_mismatch 66.41 - 69.06 No other positions
WmFPC_Contig214 Contig_W82_mismatch 63.34 - 72.12 No other positions