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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Soybean-GmComposite2003
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps A2
Start
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
AFLP
Gene
PCR
QTL_fungal
QTL_inorganic
QTL_insect
QTL_leaf-stem
QTL_nematode
QTL_oil
QTL_other-seed
QTL_pod
QTL_protein
QTL_reprod-period
QTL_root
QTL_whole-plant
QTL_yield
RAPD
RFLP
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
map_based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Soybean - GmComposite2003 [ View Map Set Info ]
Map Name: A2
Map Start: 0 cM
Map Stop: 165.72 cM
Features by Type:
1 AFLP
10 Gene
1 PCR
16 QTL_fungal
4 QTL_inorganic
1 QTL_insect
9 QTL_leaf-stem
23 QTL_nematode
14 QTL_oil
54 QTL_other-seed
7 QTL_pod
16 QTL_protein
2 QTL_reprod-period
4 QTL_root
14 QTL_whole-plant
7 QTL_yield
4 RAPD
53 RFLP
70 SNP
72 SSR
382 Total

Map Features

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Items 26 to 50 of 382.       Previous | of 16 | Next
Soybean - GmComposite2003 - A2
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Leaflet shape 9-1 QTL_leaf-stem 35.80017 - 37.8 No other positions
Leaflet width 1-1 QTL_leaf-stem 66.3 - 68.3 No other positions
Leaflet width 6-1 QTL_leaf-stem 53.9 - 55.9 No other positions
Stem strength, main 1-1 QTL_leaf-stem 24.8 - 28.2 No other positions
Stem strength, main 1-2 QTL_leaf-stem 36.11 - 40.01 No other positions
cqSCN-002 QTL_nematode 47 - 49 No other positions
SCN 1-1 QTL_nematode 31.22 - 33.22 No other positions
SCN 13-2 QTL_nematode 53.2 - 55.2 No other positions
SCN 19-1 QTL_nematode 45.6 - 53.1 No other positions
SCN 27-2 QTL_nematode 47.6 - 49.6 No other positions
SCN 29-5 QTL_nematode 49.39 - 60.59 No other positions
SCN 3-1 QTL_nematode 47.8 - 49.8 No other positions
SCN 30-3 QTL_nematode 59.59 - 61.59 No other positions
SCN 33-2 QTL_nematode 25.9 - 51.5 No other positions
SCN 36-1 QTL_nematode 45.29 - 51.5 No other positions
SCN 36-2 QTL_nematode 45.29 - 51.5 No other positions
SCN 37-4 QTL_nematode 100.08 - 118.63 No other positions
SCN 39-1 QTL_nematode 52.21 - 55.91 No other positions
SCN 39-8 QTL_nematode 52.26 - 57.56 No other positions
SCN 40-1 QTL_nematode 48 - 51.57 No other positions
SCN 41-4 QTL_nematode 52.7 - 54.7 No other positions
SCN 41-5 QTL_nematode 52.7 - 54.7 No other positions
SCN 42-1 QTL_nematode 50.7 - 65.7 No other positions
SCN 8-4 QTL_nematode 65.8 - 67.8 No other positions
SCN 8-5 QTL_nematode 53.20033 - 55.2 No other positions