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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Soybean-LG
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps M
Start
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Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Contig_W82
Contig_W82_mismatch
Marker_BARCssr
Marker_BARCssr_confirmed
Marker_RFLP
Marker_SSR-from-BAC
Marker_SSR-from-BAC_confirmed
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
map_based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Soybean - LG [ View Map Set Info ]
Map Name: M
Map Start: 0 cM
Map Stop: 144.57 cM
Features by Type:
20 Contig_W82
32 Contig_W82_mismatch
16 Marker_BARCssr
4 Marker_BARCssr_confirmed
4 Marker_RFLP
5 Marker_SSR-from-BAC
10 Marker_SSR-from-BAC_confirmed
91 Total

Map Features

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Items 1 to 25 of 91.       of 4 | Next
Soybean - LG - M
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
WmFPC_Contig182 Contig_W82_mismatch 62.13 - 65.4 No other positions
M_m_SSR2838_1 Marker_SSR-from-BAC_confirmed 65.4 Soybean - CONTIG - WmFPC_Contig182 M_m_SSR2838_1 Marker_SSR-from-BAC_confirmed 4.87 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - M SSR2838_1 SSR 65.4 (cM) Automated name-based View Maps
WmFPC_Contig201 Contig_W82_mismatch 6.53 - 9.15 No other positions
WmFPC_Contig202 Contig_W82_mismatch 5.62 - 10.05 No other positions
WmFPC_Contig214 Contig_W82_mismatch 61.4 - 70.18 No other positions
WmFPC_Contig229 Contig_W82_mismatch 45.69 - 48.51 No other positions
M_r_A131_1 Marker_RFLP 47.1 Soybean - GmConsensus30 - M A131_1 RFLP 47.12 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - H A131_2 RFLP 62.36 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig2094 Unmapped_r_A131_101 Marker_RFLP 0.72 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - M A131_1 RFLP 47.11 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - H A131_2 RFLP 62.37 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig229 M_r_A131_1 Marker_RFLP 1.99 (cM) Automated name-based View Maps
WmFPC_Contig246 Contig_W82_mismatch 129.31 - 138.35 No other positions
WmFPC_Contig301 Contig_W82_mismatch 66.27 - 67.69 No other positions
WmFPC_Contig323 Contig_W82_mismatch 132.26 - 135.4 No other positions
WmFPC_Contig341 Contig_W82_mismatch 139.82 - 144.57 No other positions
M_r_A504_1 Marker_RFLP 142.2 Soybean - CONTIG - WmFPC_Contig1882 M_r_A504_1 Marker_RFLP 0.67 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - M A504_1 RFLP 142.18 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig2533 Unmapped_r_A504_101 Marker_RFLP 0.98 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - M A504_1 RFLP 142.17 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig341 M_r_A504_1 Marker_RFLP 1.5 (cM) Automated name-based View Maps
WmFPC_Contig369 Contig_W82_mismatch 74.14 - 85.88 No other positions
WmFPC_Contig381 Contig_W82_mismatch 9.03 - 18.09 No other positions
M_m_Satt201_1 Marker_BARCssr 13.56 Soybean - CONTIG - WmFPC_Contig381 M_m2_Satt201_1 Marker_BARCssr 2.48 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - M Satt201 SSR 13.56 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - M Satt201 SSR 13.56 (cM) Automated name-based View Maps
WmFPC_Contig462 Contig_W82_mismatch 111.05 - 120.4 No other positions
M_m_Satt618_1 Marker_BARCssr 111.05 Soybean - GmComposite2003 - M Satt618 SSR 111.05 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - M Satt618 SSR 111.06 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig462 M_m2_Satt618_1 Marker_BARCssr 0.87 (cM) Automated name-based View Maps
M_m_SSR2277_1 Marker_SSR-from-BAC 117 Soybean - CONTIG - WmFPC_Contig462 M_m_SSR2277_1 Marker_SSR-from-BAC 0.08 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - M SSR2277_1 SSR 117 (cM) Automated name-based View Maps
M_r_K227_1 Marker_RFLP 120.4 Soybean - CONTIG - WmFPC_Contig462 M_r_K227_1 Marker_RFLP 1.69 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - D1a K227_2 RFLP 51.08 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - M K227_1 RFLP 120.37 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - M K227_1 RFLP 120.37 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - G K227_3 RFLP 76 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - D1a K227_2 RFLP 51.08 (cM) Automated name-based View Maps
WmFPC_Contig539 Contig_W82_mismatch 73.06 - 79.75 No other positions
WmFPC_Contig707 Contig_W82_mismatch 75.62 - 77.2 No other positions
WmFPC_Contig1119 Contig_W82_mismatch 74.06 - 77.08 No other positions
WmFPC_Contig1274 Contig_W82_mismatch 62.13 - 65.79 No other positions
WmFPC_Contig1697 Contig_W82_mismatch 110.46 - 113.7 No other positions
M_m_Satt210_1 Marker_BARCssr 112.08 Soybean - GmConsensus30 - M Satt210 SSR 112.08 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - M Satt210 SSR 112.08 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig1697 M_m2_Satt210_1 Marker_BARCssr 0.28 (cM) Automated name-based View Maps