CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Help | Tutorial


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Soybean-LG
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps E
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Contig_W82
Contig_W82_mismatch
Marker_BARCssr
Marker_BARCssr_confirmed
Marker_RFLP
Marker_SSR-from-BAC
Marker_SSR-from-BAC_confirmed
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
map_based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Soybean - LG [ View Map Set Info ]
Map Name: E
Map Start: -2.57 cM
Map Stop: 72.69 cM
Features by Type:
17 Contig_W82
36 Contig_W82_mismatch
13 Marker_BARCssr
4 Marker_BARCssr_confirmed
7 Marker_RFLP
5 Marker_SSR-from-BAC
6 Marker_SSR-from-BAC_confirmed
88 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 88.       of 4 | Next
Soybean - LG - E
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
WmFPC_Contig214 Contig_W82_mismatch 44.93 - 47.5 No other positions
E_m_Satt355_1 Marker_BARCssr 45.15 Soybean - GmConsensus30 - E Satt355 SSR 45.15 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig214 E_m2_Satt355_1 Marker_BARCssr 3.71 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - E Satt355 SSR 45.15 (cM) Automated name-based View Maps
E_m_Satt716_1 Marker_BARCssr 45.63 Soybean - GmConsensus30 - E Satt716 SSR 45.63 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig214 E_m2_Satt716_1 Marker_BARCssr 1.86 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - E Satt716 SSR 45.63 (cM) Automated name-based View Maps
E_m_SSR3657_1 Marker_SSR-from-BAC 47.4 Soybean - GmComposite2003 - E SSR3657_1 SSR 47.4 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig214 E_m_SSR3657_1 Marker_SSR-from-BAC 0.59 (cM) Automated name-based View Maps
E_m_SSR0759_1 Marker_SSR-from-BAC_confirmed 47.5 Soybean - GmComposite2003 - E SSR0759_1 SSR 47.5 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig214 E_m_SSR0759_1 Marker_SSR-from-BAC_confirmed 0.59 (cM) Automated name-based View Maps
WmFPC_Contig312 Contig_W82_mismatch 42.36 - 47.6 No other positions
WmFPC_Contig322 Contig_W82_mismatch 44.71 - 48.69 No other positions
E_m_SSR1766_1 Marker_SSR-from-BAC_confirmed 46.7 Soybean - GmComposite2003 - E SSR1766_1 SSR 46.7 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig322 E_m_SSR1766_1 Marker_SSR-from-BAC_confirmed 3.58 (cM) Automated name-based View Maps
WmFPC_Contig369 Contig_W82_mismatch -2.57 - 9.17 No other positions
WmFPC_Contig381 Contig_W82_mismatch 14.76 - 23.82 No other positions
E_m_Satt384_1 Marker_BARCssr_confirmed 19.29 Soybean - GmConsensus30 - E Satt384 SSR 19.3 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - E Satt384 SSR 19.29 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig381 E_m_Satt384_1 Marker_BARCssr_confirmed 7.04 (cM) Automated name-based View Maps
WmFPC_Contig400 Contig_W82_mismatch 44.45 - 47.15 No other positions
E_m_SSR2520_1 Marker_SSR-from-BAC 45.8 Soybean - GmComposite2003 - E SSR2520_1 SSR 45.8 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig400 E_m_SSR2520_1 Marker_SSR-from-BAC 0.51 (cM) Automated name-based View Maps
WmFPC_Contig529 Contig_W82_mismatch 41.59 - 45.12 No other positions
WmFPC_Contig551 Contig_W82_mismatch 41.82 - 48.98 No other positions
WmFPC_Contig610 Contig_W82_mismatch 35.98 - 38.62 No other positions
WmFPC_Contig789 Contig_W82_mismatch 0.48 - 6.12 No other positions
WmFPC_Contig1056 Contig_W82_mismatch 41.84 - 44.88 No other positions
WmFPC_Contig1276 Contig_W82_mismatch 69.91 - 72.69 No other positions
E_m_Satt230_1 Marker_BARCssr 71.3 Soybean - GmConsensus30 - E Satt230 SSR 71.31 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig2701 E_r_Satt230_1 Marker_RFLP 0.18 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig1276 E_r_Satt230_1 Marker_RFLP 0.54 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - E Satt230 SSR 71.3 (cM) Automated name-based View Maps
WmFPC_Contig1399 Contig_W82_mismatch 41.78 - 48.18 No other positions
WmFPC_Contig1570 Contig_W82_mismatch 39.77 - 44.93 No other positions
WmFPC_Contig1621 Contig_W82_mismatch 39.16 - 41.24 No other positions
E_m_Satt699_1 Marker_BARCssr 41.24 Soybean - GmComposite2003 - E Satt699 SSR 41.24 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig2679 E_m2_Satt699_1 Marker_BARCssr 0.19 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig1621 E_m2_Satt699_1 Marker_BARCssr 0.44 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - E Satt699 SSR 41.24 (cM) Automated name-based View Maps
WmFPC_Contig1891 Contig_W82_mismatch 26 - 59.5 No other positions