CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Help | Tutorial


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Soybean-LG
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps C2
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Contig_W82
Contig_W82_mismatch
Marker_BARCssr
Marker_BARCssr_confirmed
Marker_RFLP
Marker_SSR-from-BAC
Marker_SSR-from-BAC_confirmed
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
map_based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Soybean - LG [ View Map Set Info ]
Map Name: C2
Map Start: -0.5 cM
Map Stop: 134.19 cM
Features by Type:
21 Contig_W82
38 Contig_W82_mismatch
16 Marker_BARCssr
2 Marker_BARCssr_confirmed
5 Marker_RFLP
3 Marker_SSR-from-BAC
8 Marker_SSR-from-BAC_confirmed
93 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 93.       of 4 | Next
Soybean - LG - C2
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
WmFPC_Contig163 Contig_W82_mismatch 108.3 - 118.94 No other positions
WmFPC_Contig165 Contig_W82_mismatch 110.56 - 120.39 No other positions
WmFPC_Contig181 Contig_W82_mismatch 108.14 - 117.52 No other positions
WmFPC_Contig204 Contig_W82_mismatch 96.31 - 99.83 No other positions
C2_m_Satt363_1 Marker_BARCssr 98.07 Soybean - GmComposite2003 - C2 Satt363 SSR 98.07 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig204 C2_m2_Satt363_1 Marker_BARCssr 0.54 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - C2 Satt363 SSR 98.07 (cM) Automated name-based View Maps
WmFPC_Contig214 Contig_W82_mismatch 123.83 - 132.61 No other positions
WmFPC_Contig219 Contig_W82_mismatch 43.96 - 47.54 No other positions
C2_m_Satt291_1 Marker_BARCssr 45.75 Soybean - GmComposite2003 - C2 Satt291 SSR 45.75 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig7350 C2_m2_Satt291_1 Marker_BARCssr 6.41 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig219 C2_m2_Satt291_1 Marker_BARCssr 2.53 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - C2 Satt291 SSR 45.76 (cM) Automated name-based View Maps
WmFPC_Contig240 Contig_W82_mismatch 108.78 - 115.89 No other positions
WmFPC_Contig265 Contig_W82_mismatch 96.33 - 99.33 No other positions
WmFPC_Contig271 Contig_W82_mismatch 129.97 - 133.43 No other positions
C2_r_A748_1 Marker_RFLP 131.7 Soybean - CONTIG - WmFPC_Contig519 C2_r_A748_1 Marker_RFLP 0.54 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - C2 A748_1 RFLP 131.75 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - H A748_2 RFLP 90.25 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - H A748_2 RFLP 90.25 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - C2 A748_1 RFLP 131.75 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig2913 Unmapped_r_A748_101 Marker_RFLP 0.24 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig271 C2_r_A748_1 Marker_RFLP 3.11 (cM) Automated name-based View Maps
WmFPC_Contig312 Contig_W82_mismatch 110.21 - 115.45 No other positions
WmFPC_Contig341 Contig_W82_mismatch 100.95 - 105.7 No other positions
WmFPC_Contig421 Contig_W82_mismatch 117.45 - 117.76 No other positions
C2_m_Sat_238_1 Marker_BARCssr 117.45 Soybean - GmConsensus30 - C2 Sat_238 SSR 117.46 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig421 C2_m2_Sat_238_1 Marker_BARCssr 2.5 (cM) Automated name-based View Maps
Soybean - GmComposite2003 - C2 Sat_238 SSR 117.45 (cM) Automated name-based View Maps
C2_m_Satt460_1 Marker_BARCssr 117.76 Soybean - GmComposite2003 - C2 Satt460 SSR 117.76 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig421 C2_m2_Satt460_1 Marker_BARCssr 2.9 (cM) Automated name-based View Maps
Soybean - GmConsensus30 - C2 Satt460 SSR 117.77 (cM) Automated name-based View Maps
Soybean - CONTIG - WmFPC_Contig7308 C2_m2_Satt460_1 Marker_BARCssr 5.57 (cM) Automated name-based View Maps
WmFPC_Contig462 Contig_W82_mismatch 96.78 - 98.88 No other positions
WmFPC_Contig519 Contig_W82_mismatch 129.21 - 134.19 No other positions
WmFPC_Contig756 Contig_W82_mismatch 33.62 - 42.47 No other positions
WmFPC_Contig1035 Contig_W82_mismatch 112.06 - 113.6 No other positions
WmFPC_Contig2029 Contig_W82_mismatch 111.86 - 116.53 No other positions
WmFPC_Contig2141 Contig_W82_mismatch 97.14 - 98.52 No other positions
WmFPC_Contig3697 Contig_W82_mismatch 113.33 - 113.92 No other positions
WmFPC_Contig5622 Contig_W82_mismatch 104.05 - 116.15 No other positions