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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Soybean-GmComposite2003
(Reference Set)
Min.
Correspondences
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Maps H
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 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Gene
PCR
QTL_fungal
QTL_inorganic
QTL_insect
QTL_leaf-stem
QTL_misc
QTL_nematode
QTL_oil
QTL_other-seed
QTL_pod
QTL_protein
QTL_reprod-period
QTL_whole-plant
QTL_yield
RAPD
RFLP
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
map_based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Soybean - GmComposite2003 [ View Map Set Info ]
Map Name: H
Map Start: 0 cM
Map Stop: 125.05 cM
Features by Type:
3 Gene
1 PCR
1 QTL_fungal
4 QTL_inorganic
8 QTL_insect
5 QTL_leaf-stem
5 QTL_misc
5 QTL_nematode
8 QTL_oil
21 QTL_other-seed
3 QTL_pod
6 QTL_protein
2 QTL_reprod-period
9 QTL_whole-plant
3 QTL_yield
2 RAPD
43 RFLP
44 SNP
52 SSR
225 Total

Map Features

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Items 1 to 25 of 225.       of 9 | Next
Soybean - GmComposite2003 - H
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Phytoph 9-1 QTL_fungal 17.48 - 43.68 No other positions
Fe effic 11-3 QTL_inorganic 60.2 - 84.1 No other positions
Fe effic 4-3 QTL_inorganic 60.20011 - 84.1 No other positions
Fe effic 8-3 QTL_inorganic 60.2001 - 84.1 No other positions
Flood tolerance 7-1 QTL_inorganic 83.19 - 99.5 No other positions
Bean pyralid 1-5 QTL_insect 96.47 - 108.77 No other positions
Corn earworm 1-2 QTL_insect 60.2 - 62.4 No other positions
Corn earworm 2-2 QTL_insect 49.4 - 62.4 No other positions
Corn earworm 3-2 QTL_insect 49.40003 - 62.4 No other positions
Corn earworm 7-2 QTL_insect 80 - 82 No other positions
Corn earworm 9-3 QTL_insect 53.4 - 61.3 No other positions
Pod borer 1-1 QTL_insect 53.34 - 67.16 No other positions
Pod borer 1-2 QTL_insect 67.16 - 69.12 No other positions
Leaflet area 7-2 QTL_leaf-stem 47.74 - 49.74 No other positions
Leaflet weight, specific 1-3 QTL_leaf-stem 10.25 - 12.25 No other positions
Leaflet width 2-2 QTL_leaf-stem 47.74 - 49.74 No other positions
Leaflet width 5-2 QTL_leaf-stem 14.9 - 16.9 No other positions
Leaflet width 5-3 QTL_leaf-stem 45.95 - 47.95 No other positions
Drought index 1-3 QTL_misc 81.04 - 86.48 No other positions
Drought tolerance 6-4 QTL_misc 80.42 - 89.51 No other positions
Somatic emb per explant 1-1 QTL_misc 7.48 - 9.48 No other positions
WUE 1-2 QTL_misc 32.64 - 34.64 No other positions
WUE 1-3 QTL_misc 10.25 - 12.25 No other positions
SCN 10-4 QTL_nematode 123.05 - 125.05 No other positions
SCN 10-5 QTL_nematode 120.29 - 122.29 No other positions