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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Soybean-GmComposite2003
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps D1a
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Gene
Marker
PCR
QTL_fungal
QTL_inorganic
QTL_insect
QTL_leaf-stem
QTL_misc
QTL_nematode
QTL_oil
QTL_other-seed
QTL_pod
QTL_protein
QTL_reprod-period
QTL_root
QTL_whole-plant
QTL_yield
RAPD
RFLP
SNP
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
map_based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Soybean - GmComposite2003 [ View Map Set Info ]
Map Name: D1a
Map Start: 0 cM
Map Stop: 120.88 cM
Features by Type:
4 Gene
2 Marker
3 PCR
6 QTL_fungal
4 QTL_inorganic
2 QTL_insect
7 QTL_leaf-stem
1 QTL_misc
7 QTL_nematode
6 QTL_oil
16 QTL_other-seed
6 QTL_pod
10 QTL_protein
1 QTL_reprod-period
3 QTL_root
12 QTL_whole-plant
4 QTL_yield
3 RAPD
38 RFLP
42 SNP
73 SSR
250 Total

Map Features

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Items 1 to 25 of 250.       of 10 | Next
Soybean - GmComposite2003 - D1a
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Phytoph 13-3 QTL_fungal 75.25 - 85.48 No other positions
Sclero 2-5 QTL_fungal 108.89 - 109.67 No other positions
Sclero 3-4 QTL_fungal 108.89043 - 109.67 No other positions
Sclero 4-1 QTL_fungal 108.89042 - 109.67 No other positions
Sclero 5-3 QTL_fungal 108.89041 - 109.67 No other positions
SDS 13-1 QTL_fungal 29.15 - 45.75 No other positions
Fe effic 1-2 QTL_inorganic 113.9 - 115.9 No other positions
Fe effic 1-3 QTL_inorganic 101.3 - 103.3 No other positions
Fe effic 1-4 QTL_inorganic 93.9 - 95.9 No other positions
Flood tolerance 6-1 QTL_inorganic 16.52 - 31.52 No other positions
Bean pyralid 1-1 QTL_insect 42.45 - 49.05 No other positions
Corn earworm 7-5 QTL_insect 37.1 - 39.1 No other positions
Leaflet chlorophyll 1-4 QTL_leaf-stem 104.27 - 108.88 No other positions
Leaflet chlorophyll 1-6 QTL_leaf-stem 62.36 - 77.48 No other positions
Leaflet length 1-1 QTL_leaf-stem 37.1 - 39.1 No other positions
Leaflet length 1-2 QTL_leaf-stem 33.9 - 35.9 No other positions
Leaflet shape 6-3 QTL_leaf-stem 61.4 - 63.4 No other positions
Leaflet width 6-2 QTL_leaf-stem 61.4 - 63.4 No other positions
Leaflet width 7-2 QTL_leaf-stem 61.40013 - 63.4 No other positions
Drought index 1-1 QTL_misc 62.56 - 65.62 No other positions
Jav root-knot nematode 1-1 QTL_nematode 36.9 - 38.9 No other positions
SCN 19-3 QTL_nematode 6.43 - 34.91 No other positions
SCN 20-3 QTL_nematode 6.43026 - 34.91 No other positions
SCN 21-2 QTL_nematode 6.43025 - 34.91 No other positions
SCN 26-2 QTL_nematode 43.84 - 48.14 No other positions