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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Soybean-GmComposite2003
(Reference Set)
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Correspondences
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Maps A2
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
AFLP
Gene
PCR
QTL_fungal
QTL_inorganic
QTL_insect
QTL_leaf-stem
QTL_nematode
QTL_oil
QTL_other-seed
QTL_pod
QTL_protein
QTL_reprod-period
QTL_root
QTL_whole-plant
QTL_yield
RAPD
RFLP
SNP
SSR
Other
 
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Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
map_based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Soybean - GmComposite2003 [ View Map Set Info ]
Map Name: A2
Map Start: 0 cM
Map Stop: 165.72 cM
Features by Type:
1 AFLP
10 Gene
1 PCR
16 QTL_fungal
4 QTL_inorganic
1 QTL_insect
9 QTL_leaf-stem
23 QTL_nematode
14 QTL_oil
54 QTL_other-seed
7 QTL_pod
16 QTL_protein
2 QTL_reprod-period
4 QTL_root
14 QTL_whole-plant
7 QTL_yield
4 RAPD
53 RFLP
70 SNP
72 SSR
382 Total

Map Features

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Items 1 to 25 of 382.       of 16 | Next
Soybean - GmComposite2003 - A2
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Fusarium lesion length 1-1 QTL_fungal 10.05 - 117.85 No other positions
Phytoph 11-2 QTL_fungal 50.5 - 52.5 No other positions
Phytoph 6-4 QTL_fungal 100.8 - 107.5 No other positions
Rhizoc root and hypocot rot 1-2a QTL_fungal 35.77 - 37.77 No other positions
Rhizoc root and hypocot rot 1-2b QTL_fungal 35.77003 - 37.77 No other positions
Sclero 2-2 QTL_fungal 59.59 - 61.59 No other positions
Sclero 2-3 QTL_fungal 99.09 - 101.09 No other positions
Sclero 3-2 QTL_fungal 59.59047 - 61.59 No other positions
Sclero 5-1 QTL_fungal 59.59046 - 61.59 No other positions
Sclero 6-2 QTL_fungal 59.59045 - 61.59 No other positions
Sclero 8-1 QTL_fungal 121.4 - 125.11 No other positions
Sclero 9-1 QTL_fungal 104.83 - 114.83 No other positions
Sclero 9-2 QTL_fungal 120.27 - 136.61 No other positions
SDS 13-13 QTL_fungal 14.99 - 27.9 No other positions
SDS 13-7 QTL_fungal 2 - 13 No other positions
SDS 5-2 QTL_fungal 53.2 - 55.2 No other positions
Al tolerance 1-1 QTL_inorganic 117.5 - 119.5 No other positions
Fe effic 1-1 QTL_inorganic 47.8 - 49.8 No other positions
Flood tolerance 6-5 QTL_inorganic 86.83 - 100.83 No other positions
Flood tolerance 7-2 QTL_inorganic 54.91 - 67.86 No other positions
Rag 2-1 QTL_insect 115.73 - 117.73 No other positions
Leaflet area 1-5 QTL_leaf-stem 106.36 - 108.36 No other positions
Leaflet area 3-1 QTL_leaf-stem 31.22 - 33.22 No other positions
Leaflet shape 6-1 QTL_leaf-stem 53.9 - 55.9 No other positions
Leaflet shape 8-1 QTL_leaf-stem 35.8 - 37.8 No other positions