CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Help | Tutorial


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Soybean-CONTIG
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps WmFPC_Contig561
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
Clone_F.MTP
Clone_W82
Clone_W82_marker
Marker_BARCssr
Marker_BARCssr_confirmed
Marker_RFLP
Marker_SSR-from-BAC
Marker_SSR-from-BAC_confirmed
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
map_based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Soybean - CONTIG [ View Map Set Info ]
Map Name: WmFPC_Contig561
Map Start: 0 cM
Map Stop: 2.23 cM
Features by Type:
6 Clone_F.MTP
114 Clone_W82
30 Clone_W82_marker
2 Marker_BARCssr
1 Marker_BARCssr_confirmed
1 Marker_RFLP
23 Marker_SSR-from-BAC
1 Marker_SSR-from-BAC_confirmed
178 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 178.       of 8 | Next
Soybean - CONTIG - WmFPC_Contig561
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
O_m_Satt633_1 Marker_BARCssr_confirmed 0.57 Soybean - LG - O O_m_Satt633_1 Marker_BARCssr_confirmed 56.93 (cM) Automated name-based View Maps
GM_WBb0082E05 Clone_W82_marker 0.95 - 1.21 No other positions
GM_WBb0095I11 Clone_W82 1.53 - 1.89 No other positions
GM_WBb0119K09 Clone_W82 0.06 - 0.38 No other positions
GM_WBc0103D22 Clone_W82 0.74 - 1.04 No other positions
GM_WBc0032K11 Clone_W82 0.98 - 1.17 No other positions
GM_WBc0090G13 Clone_W82 0.2 - 0.42 No other positions
GM_WBb0011C02 Clone_W82 1.69 - 2.02 No other positions
GM_WBc0027P11 Clone_W82 1.63 - 1.83 No other positions
Unmapped_m_SSR2604_101 Marker_SSR-from-BAC 0.76 No other positions
GM_WBa0013B11 Clone_W82_marker 0.63 - 0.89 No other positions
GM_WBb0099G02 Clone_W82 1.66 - 1.97 No other positions
GM_WBc0002L05 Clone_W82 0.28 - 0.41 No other positions
Unmapped_m_SSR6598_101 Marker_SSR-from-BAC 0.6 No other positions
GM_WBb0041G09 Clone_W82_marker 0.46 - 0.74 No other positions
GM_WBb0074D07 Clone_W82 0.97 - 1.28 No other positions
GM_WBa0071C09 Clone_W82 1.24 - 1.43 No other positions
GM_WBb0014P13 Clone_W82 1.85 - 2.17 No other positions
FH76M08 Clone_F.MTP 1.78 - 2.13 No other positions
GM_WBb0119K07 Clone_W82 1.23 - 1.54 No other positions
Unmapped_m_SSR1894_101 Marker_SSR-from-BAC 1.38 No other positions
Unmapped_m_SSR1922_101 Marker_SSR-from-BAC 1.38 No other positions
GM_WBa0052C02 Clone_W82_marker 1.19 - 1.57 No other positions
GM_WBb0022P17 Clone_W82_marker 0.79 - 1.14 No other positions
GM_WBc0060G06 Clone_W82 2.07 - 2.2 No other positions